Software Tools :: RNA Secondary Structure Analysis
Background
RNA
Secondary Structure
Programs
RNA Secondary Structure Analysis Programs
- GCG Programs
- MFold: Predict optimal and suboptimal secondary structures for nucleic acid sequences (M. Zuker)
- PlotFold: Graphically display secondary structures found by MFold
Related Tools
- GCG Programs
- StemLoop: Find inverted repeats in nucleic acid sequences
- Repeat: Find direct repeats in nucleic acid sequences
- EMBOSS Programs
- einverted: Find inverted repeats in nucleic acid sequences
- equicktandem: Find tandem repeats in nucleic acid sequences
- etandem: Find tandem repeats in nucleic acid sequences
- palindrome: Find inverted repeats in nucleic acid sequences
- banana: Find bends and curvature in B-DNA sequences
- btwisted: Calculate twisting in B-DNA sequences
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