Software Tools
The CGB provides access to bioinformatics analysis software through
several web-based interfaces. These web interfaces provide a better
interface than the original command line. Some of the available tools
are restricted to IU researchers only because of commercial license
agreements.
Software Overview
The Software by Function
section offers a more intuitive and thorough overview of what each sequence
analysis program can be used for, and includes documentation, notes, and links
for each application. The available tools are broken down into several categories.
Finding the right tool is simple; pick a category to match the analysis you're
interested in.
| GCG |
A comprehensive sequence analysis package from Accelrys. |
| TRANSFAC |
BioBase's transcription factor database. |
Other Analysis
Programs |
A collection of standalone analysis programs that don't fit anywhere else |
Community Software
| EMBOSS |
A comprehensive set of open source software for sequence analysis. |
| PHYLIP |
A package of programs for inferring phylogenies (evolutionary trees). |
Other Analysis
Programs |
A collection of standalone analysis programs that don't fit anywhere else |
This website will look much better in a browser that supports
web standards, but it has been designed so
that it is still usable and accessible to any browser or web-enabled device.
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